Bioperl Courses

Bioperl for Biologists !!!

perl is a powerful high-level, object-oriented programming language and It is simple easy-to-use syntax, making it the perfect language for someone trying to learn computer programming for the first time. The advantage of perl usage in bioinformatics is the availability of libraries and third-party toolkits which extend the functionality of the core language into virtually every biological domain.

Bioperl is a set of freely available tools which are developed for biological computation written in perl programming language. The central object in bioinformatics is the sequence, hence the main purpose of Bioperl is to develop perl libraries and applications which address the need of current and future work in bioinformatics. So, taking into consideration , we have designed our bioperl course.

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Participants will be introduced with its applicability to real-time programming problem solving. All our training content is as per industrial requirement and 100% practical exposure which will help candidate to make their better career in the field of programming and bioinformatics.
More than 300+ candidates have taken this course and have successfully build their career in Programming and Bioinformatics Hurry up and register soon...To become expert in Programming !

Bioperl Training Information

Application

Bioperl

Period of Training

Online - 15 Days Training [ 2 Hours Daily [ Monday To Friday ] ]

Course Fee

For course fee please request you to contact us at info@arraygen.com

Training Starting Date

Our training is one to one and training can also be started anytime and anydate as per the candidate convenience. ** Weekend Batches are also available as per the request

Training Slots

Our working Time is 9:00 AM to 6:00 PM Indian Time Available slots - 9:00 AM to 11:00 AM / 11:00 AM to 1:00 PM / 2:00 PM to 4:00 PM / 4:00 PM to 6:00 PM

Training Mode

Online
Online(For online training candidate have to install Skype and AnyDesk / ZOOM )(it is same like offline)
All our training is one to one and 100% focus with individual candidate which provides 100% learning.

Module - I

Perl

Topics

  • Introduction to Perl and discussion
  • Why we Program? What Makes Perl Special?
  • Run the Perl Script
  • Interactive Mode
  • Hello World
  • Data Types and Variables
  • Scalars
  • Arrays
  • Hashes
  • Conditions and expressions
  • ‘while’ loop and usage
  • ‘for’ loop and its usage
  • In-build functions and Defining a function
  • Writing script and building body structure
  • File handling
  • Reading, writing files using perl
  • Reading data from fasta, faa, txt, csv etc generated in genomic work flow.
  • Data calculation, manipulation and representation (Building custom scripts for genomics)
  • CPAN module installation

Module - II

BioPerl

Topics

  • Introduction to BioPerl
  • Installation of Bioperl
  • Creating a sequence Object
  • Example Sequence Objects
  • Translating
  • Reverse complement of sequnce
  • Get sub sequnce
  • Fasta File Handling
  • Reading a sequnce from fasta file
  • Writing a sequence to a fasta file
  • Genbank File Handling
  • Understanding SeqFeature object
  • Retrieving a sequence from a database: get_Seq_by_id(), get_Seq_by_acc()
  • Retrieving multiple sequences from a database
  • Retrieve sequnce and information using EUtilities in BioPerl
  • Running applications: BLAST

Eligibility

B.Tech. / B.Sc. / M.Tech. / M.Sc. in Biological Science, Computer science, Pharmacy, Agriculture, Biotechnology, Molecular biology, Medicine, clinical research and other relevant Qualification in the life sciences areas are eligible.

Certificate

All the participants will receive certificates on successful completion of training

Place

ArrayGen, Pune, India

Contact

info@arraygen.com

Send Enquiry
The workshops and training programs can be held on-site at the client’s location or online one to one.

If you want to conduct a Seminar or Workshop or short-term Training in Bioinformatics, Bio-IT, Next Generation Sequencing, Genomics, etc. at your College/ University/ Conference then feel free to write to us at info@arraygen.com