Application
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Bioperl
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Period of Training
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Offline - 15 Days Training [ 2 Hours Daily [ Monday To Friday ] ] /
Online - 15 Days Training [ 2 Hours Daily [ Monday To Friday ] ]
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Course Fee
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For course fee please request you to contact us at info@arraygen.com
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Training Starting Date
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Our training is one to one and training can also be started anytime and anydate as per the candidate convenience.
** Weekend Batches are also available as per the request
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Training Slots
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Our working Time is 9:00 AM to 6:00 PM Indian Time
Available slots - 9:00 AM to 11:00 AM / 11:00 AM to 1:00 PM / 2:00 PM to 4:00 PM / 4:00 PM to 6:00 PM
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Training Mode
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Online/Offline
Online(For online training candidate have to install Skype and AnyDesk / ZOOM )(it is same like offline)
Offline(For offline training candidate have to come to head office Pune and bring their own laptop).
All our training is one to one and 100% focus with individual candidate which provides 100% learning.
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Module - I
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Perl
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Topics
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Introduction to Perl and discussion
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Why we Program? What Makes Perl Special?
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Run the Perl Script
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Interactive Mode
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Hello World
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Data Types and Variables
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Scalars
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Arrays
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Hashes
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Conditions and expressions
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‘while’ loop and usage
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‘for’ loop and its usage
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In-build functions and Defining a function
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Writing script and building body structure
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File handling
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Reading, writing files using perl
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Reading data from fasta, faa, txt, csv etc generated in genomic work flow.
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Data calculation, manipulation and representation (Building custom scripts for genomics)
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CPAN module installation
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Module - II
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BioPerl
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Topics
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Introduction to BioPerl
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Installation of Bioperl
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Creating a sequence Object
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Example Sequence Objects
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Translating
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Reverse complement of sequnce
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Get sub sequnce
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Fasta File Handling
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Reading a sequnce from fasta file
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Writing a sequence to a fasta file
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Genbank File Handling
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Understanding SeqFeature object
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Retrieving a sequence from a database: get_Seq_by_id(), get_Seq_by_acc()
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Retrieving multiple sequences from a database
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Retrieve sequnce and information using EUtilities in BioPerl
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Running applications: BLAST
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Eligibility
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B.Tech. / B.Sc. / M.Tech. / M.Sc. in Biological Science, Computer science, Pharmacy, Agriculture, Biotechnology, Molecular biology, Medicine, clinical research and other relevant Qualification in the life sciences areas are eligible.
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Certificate
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All the participants will receive certificates on successful completion of training
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Place
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ArrayGen, Pune, India
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Contact
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info@arraygen.com
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