GAME Version 2 — Genomic Analyses Made Easy (Coming Soon..............)
GAME v2 is a next-generation, user-friendly bioinformatics platform that integrates AI-driven intelligence with classical genomics pipelines. Designed for plant scientists, clinical researchers, and biomedical professionals, GAME v2 transforms raw sequencing data into publishable insights with unmatched speed and precision.
What’s New in Version 2
- Smart & Automated:GUI-driven workflows with intelligent parameter optimization.
- AI-Powered Insights:New modules for plant breeding predictions and cancer transcriptomics.
- Optimized Performance: Runs on Ubuntu v22.04 (64 GB RAM & 500 GB storage).
- Manuscript Ready: Exports all results to Word & Excel for quick scientific writing.
Core Analysis Modules
🔍 Genome Analysis
- Illumina, Nanopore, and PacBio support.
- Genome assembly, scaffolding, completeness assessment.
- Repeat masking, functional annotation, SNP detection.
- Pathway & gene networks, genome phylogeny.
- Advanced visualization: Circos, synteny, blob, and snail plots.
🌱 Organelle Genomes
- Chloroplast & mitochondrial assembly with circular genome mapping.
- Automated annotation and visualization.
🎤 Transcriptome Analysis
- De novo and reference-based assemblies.
- Differential expression profiling.
- Functional insights with GO & pathway enrichment.
- Co-expression networks, volcano plots, and heatmaps.
🌍 Metagenome Analysis
- OTU clustering, taxonomy assignment.
- Stacked bar plots, Krona charts, phylogeny.
- Alpha and beta diversity metrics for community-level exploration.
🧬 Clinical Genomics: Mutational Analysis & Variant Calling
- Germline & somatic variant detection.
- SNPs, indels, and structural variations.
- Annotation against clinical variant databases.
- Biomarker discovery and disease-association insights.
AI-Driven Innovations in GAME v2
🌱 AI-Based Smart Plant Breeding Prediction
Harness the power of machine learning algorithms to accelerate crop improvement:
- Predicts yield, stress tolerance, and disease resistance based on genomic data.
- Identifies elite parental lines and optimal crosses for breeding programs.
- AI-guided genomic selection models to reduce breeding cycles and increase precision.
🧠 AI-Powered RNA-Seq for Human Cancer Research
GAME v2 integrates artificial intelligence with transcriptomics to advance biomedical discovery:
- Automated analysis of RNA-seq data from human cancer cell lines.
- AI-driven detection of oncogenes, tumor suppressors, and splicing variants.
- Predicts drug response markers and immune checkpoint expression.
- Generates interpretable, publication-ready cancer gene signatures for translational research.
📑 Output You Can Trust
- Publication-ready tables, figures, and reports.
- Organized folder structure for easy navigation.
- One-click Word report generation for immediate manuscript drafting.
⚡ GAME Version 2: Your AI-empowered, all-in-one platform for genome, transcriptome, metagenome, clinical, plant breeding, and cancer genomics — just one click away.