NGS Services

ArrayGen Technologies offers end-to-end Next-Generation Sequencing (NGS) services designed to accelerate research and clinical discoveries with high-throughput, cost-effective, and reliable sequencing solutions. With a strong foundation in genomics and bioinformatics, ArrayGen delivers customized NGS workflows tailored to diverse applications in research, healthcare, agriculture, and biotechnology.
Each project is supported by expert consultation, high-quality sample processing, state-of-the-art sequencing platforms, and advanced bioinformatics analysis for comprehensive insights. From raw data generation to meaningful interpretation, ArrayGen ensures data accuracy, reproducibility, and actionable results.
Whether you're exploring complex disease mechanisms, identifying novel biomarkers, or studying microbial diversity, ArrayGen’s NGS services empower your research with precision, speed, and scalability.

NGS Services Description Price
Reference Based RNASeq We use highly robust statistical models to identify differentially expressed genes (DEG) from raw RNA-Seq data. All list of DEG Up and Down along with GO and pathway enrichment and different plots heatmap, Volcano. We also help you assess data quality and verify your experimental design with all undersatnding of your analysis as well as different differential Expression tool EdgeR or DESEQ2 or Cuffdiff can be used as per your requirement.
Denovo Based RNASeq We use highly robust statistical models to identify differentially expressed genes (DEG) from raw RNA-Seq data. transcriptome assembly and validation will be made using trinity. All list of DEG Up and Down along with GO and pathway enrichment and different plots heatmap, Volcano. We also help you assess data quality and verify your experimental design with all undersatnding of your analysis as well as different differential Expression tool EdgeR or DESEQ2 or Cuffdiff can be used as per your requirement.
DNASeq - Variation Calling We use highly robust statistical models to identify potential mutations either SNP / Inerstions / Deletions / CNVs from whole genome or whole exome data. We are expert to provide variations annotations as well as list of few potential variations which can be potential markers to identify disease cause. We have provided whole exome automated pipeline recently to epigeneres cancer study company.
ChipSeq - DNA-Protein Binding We use highly robust statistical models to identify DNA- protein binding regions from whole genome data. We are expert to provide peak regions / annotations to upstream / downstream as well as potential motifs involved in the region.
Targeted Metagenomics Targeted metagenome analysis we provide eith 16s rRNA or 18s RNA or ITS regions and species detected. We use qiime2 pipeline to make more standered report and all results provided as per the publication standerds.
Whole Genome Metagenome We are highly expertise with whole genome metagenome analysis and we use different tools like squeezmeta and bining process as well as bin vizualization using anvio. We also integrate post analysis with sqmtools for making highly interactive plots like krona / stacked bar plot / heatmap abundance plot. All the results are provided ready to use. We also accept client request as needed publication standered for tables / figures.
DNA Methylation DNA methylation analysis like RRBS methods as well as all analysis report using bismark and methylkit. Differential methylated reports and hypo as well as hyper methylated regions along with annotation.
Single Cell RNASeq We are highly expertise in SCRNAseq data analysis and cell ranger tool is used to preprocess raw data and seurat as well as highly specilized in house python scripts have been developed. We deliver high interactive plots and advanced QC matrics and Interactive tSNE plots with cell type and cluster information as well as heatmap vizualization.
LncRNASeq We use highly expertise in detecting LncRNA as well as filter only non code RNAs and removal of all coding potential RNAs.
miRNASeq We use highly robust statistical models to identify differentially expressed miRNAs (DEG) from raw RNA-Seq data(Known and novel miRNAs). All list of DEG Up and Down along with target genes with GO and pathway enrichment and different plots heatmap, Volcano. We also help you assess data quality and verify your experimental design with all undersatnding of your analysis as well as different differential Expression tool EdgeR or DESEQ2 can be used as per your requirement.
ATASeq We use highly expertise in analysing ATASeq data. We are expert to provide peak regions / annotations to upstream / downstream as well as potential motifs involved in the region.
CRISPR Data Analysis We are highly experts in designing sgRNA as well as data analysis for crispr edited regions. Reports with variations for offsite or onsite along with annotation is reported.
NGS Automated Pipeline Development We are highly expertise in making any NGS data analysis from raw data to reports in one click with automated scripts based on python scripts.
NGS Genomics Database Development We are highly expertise in genomics database development either stand alone GUI software or command line based.
Circos Genome Representation We are highly expertise in generating advanced circular genome vizualziations using circos tools.
TCGA Data Analysis We can analyze data from TCGA for any cancer type and further provide statistically analyzed results.
Genome Annotation We are highly expertise for the genome / transcriptome annotation either for plant or any eukaryotes or any prokaryotes.
Metatranscriptome Data Analysis We use highly robust statistical models to identify differentially expressed genes (DEG) from raw metatranscriptomic/metabolomics data. All list of DEG Up and Down along with GO and pathway enrichment and different plots heatmap, Volcano. We also help you assess data quality and verify your experimental design with all undersatnding of your analysis as well as different differential Expression tool EdgeR or DESEQ2 can be used as per your requirement. We also use metaphyln or Humann for advance analysis.
Custom Data Analysis We provide any custom data analysis for any NGS applications / microarray / genomics / bioinformatics. We are expertise in development of algorithms for any NGS application(automated scripts) as well as database development. We have recently developed automated python scripts for epegeneres biotech company for transcriptome as well as whole exome. We developed database only for cancer study based on variations and expression data for epigeneres.
Code Platform Description Price
ARSEQ1 Novaseq6000 Transcriptome Sequencing –10 Gb Data Per Sample–2X150 bp PE
ARSEQ2 Novaseq6000 Small RNA Sequencing and Analysis–1x50bp 30 Million reads
ARSEQ3 Novaseq6000 Denovo Whole Genome Sequencing 25–30 Gb Data
ARSEQ4 Novaseq6000 Chip Sequencing and Analysis with 3 Gb Data Per Sample-2x100bp PE
ARSEQ5 Novaseq6000 Exome Sequencing And Analysis on Illumina Novaseq-100x Coverage
ARSEQ6 Novaseq6000 Exome Sequencing And Analysis on Illumina Novaseq-50x Coverage
ARSEQ7 Novaseq6000 Methylation/Bisulphite Sequencing on Illumina Novaseq 50x Coverage
ARSEQ8 Novaseq6000 ddRAD Sequencing and Analysis on Illumina Hiseq 96 Sample in a lane
ARSEQ9 Novaseq6000 Mitochondrial Genome Sequencing
ARSEQ10 Novaseq6000 Metatranscriptome Sequencing - 20-30 Million reads
ARSEQ11 Miseq Metagenomic Sequencing Variable Region V3/V4
ARSEQ12 Miseq Metagenomic Sequencing with Complete 16S rRNA Sequencing
ARSEQ13 Miseq Whole Genome Metagenomic Sequencing
ARSEQ14 Miseq Targeted Amplicon Sequencing